Skills clinical-decision-support
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clinical-decision-support

Safe 📁 Filesystem access

Generate Clinical Decision Support Documents

Also available from: davila7

Clinical researchers need evidence-based documents for drug development and regulatory submissions. This skill creates publication-ready clinical decision support documents with biomarker stratification and GRADE evidence grading.

Supports: Claude Codex Code(CC)
🥈 80 Silver
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Test it

Using "clinical-decision-support". Analyze 60 HER2+ breast cancer patients by hormone receptor status with trastuzumab-deruxtecan outcomes

Expected outcome:

  • Executive Summary: HR+/HER2+ vs HR-/HER2+ efficacy comparison
  • Demographics table with baseline characteristics
  • ORR: 68% vs 78% (p=0.041) favoring HR-negative
  • Median PFS: 16.2 vs 22.1 months (HR=0.74, 95% CI: 0.58-0.95)
  • Kaplan-Meier survival curves with 95% confidence bands
  • Forest plot showing subgroup analyses
  • Clinical implications with Grade 1A recommendation

Using "clinical-decision-support". Create treatment recommendations for first-line EGFR-mutant NSCLC with osimertinib

Expected outcome:

  • Strong recommendation for osimertinib 80mg daily (Grade 1A)
  • Evidence from FLAURA trial: PFS 18.9 vs 10.2 months (HR 0.46)
  • OS benefit: 38.6 vs 31.8 months (HR 0.80, p=0.046)
  • Treatment algorithm flowchart with biomarker decision points
  • Adverse event profile and monitoring requirements

Security Audit

Safe
v4 • 1/17/2026

All static findings are false positives. The skill generates legitimate clinical research documents using standard Python libraries (pandas, numpy, scipy). The 'weak cryptographic algorithm' detections are medical terminology matches (e.g., hazard ratio, recommendation strength). 'External commands' flagged are markdown backticks for documentation formatting, not shell execution. Filesystem operations are standard document generation. No malicious code, credential exfiltration, or harmful patterns exist.

21
Files scanned
9,010
Lines analyzed
1
findings
4
Total audits
Audited by: claude View Audit History →

Quality Score

82
Architecture
100
Maintainability
87
Content
30
Community
100
Security
78
Spec Compliance

What You Can Build

Drug Development Documentation

Generate biomarker-stratified cohort analyses for Phase 2/3 trials and regulatory submissions

Evidence-Based Guidelines

Create treatment recommendation reports with GRADE grading for medical societies

Submission Documents

Produce publication-ready analyses for IND/NDA submissions and advisory boards

Try These Prompts

Basic Cohort Analysis
Create a cohort analysis for 50 NSCLC patients stratified by PD-L1 expression levels. Include ORR, median PFS, and OS with hazard ratios comparing groups.
Treatment Guidelines
Generate GRADE-graded treatment recommendations for HER2+ metastatic breast cancer including first-line and subsequent therapies.
Biomarker Integration
Analyze 75 GBM patients by molecular subtype with outcomes, biomarker profiles, and treatment response comparison.
Decision Algorithm
Create a TikZ flowchart for advanced NSCLC treatment decisions based on PD-L1, EGFR, ALK, and performance status with recommendations.

Best Practices

  • Always include a complete executive summary on page 1 with 3-5 key findings in colored boxes
  • Use standard medical terminology and include trial names for evidence citations
  • Document statistical methods and include hazard ratios with 95% confidence intervals

Avoid

  • Do not include identifiable patient information - use de-identified data only
  • Avoid narrative text without data - support all recommendations with evidence tables
  • Do not skip the visual elements - include Kaplan-Meier curves and decision flowcharts

Frequently Asked Questions

What is the difference between this and treatment-plans skill?
This skill creates group-level analyses for research; treatment-plans creates individual patient care plans.
Can I use real patient data?
Only de-identified data compliant with HIPAA Safe Harbor method with all 18 identifiers removed.
What output format does it generate?
Publication-ready LaTeX documents that compile to PDF with professional tables and figures.
Do I need LaTeX installed?
Yes, to compile PDF outputs. The skill generates LaTeX code that requires pdflatex compilation.
What statistical methods are supported?
Kaplan-Meier survival analysis, hazard ratios, log-rank tests, Fisher's exact test, and GRADE evidence grading.
Can it create decision flowcharts?
Yes, generates TikZ-based clinical decision algorithms and treatment pathway diagrams.