Skills cobrapy Audit History
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Audit History

cobrapy - 4 audits

Audit version 4

Latest Safe

Jan 17, 2026, 06:29 AM

All 160 static findings are FALSE POSITIVES. The skill consists only of markdown documentation files containing Python code examples for the COBRApy metabolic modeling library. The scanner misidentified Python parenthesized imports as dynamic import() expressions, markdown backticks as shell command execution, metabolic modeling terminology (blocked reactions, essential genes) as system reconnaissance, and .get_by_id() method calls as credential access patterns. No executable code, network requests, credential handling, or malicious behavior present.

4
Files scanned
2,560
Lines analyzed
3
findings
claude
Audited by
No security issues found

Audit version 3

Safe

Jan 17, 2026, 06:29 AM

All 160 static findings are FALSE POSITIVES. The skill consists only of markdown documentation files containing Python code examples for the COBRApy metabolic modeling library. The scanner misidentified Python parenthesized imports as dynamic import() expressions, markdown backticks as shell command execution, metabolic modeling terminology (blocked reactions, essential genes) as system reconnaissance, and .get_by_id() method calls as credential access patterns. No executable code, network requests, credential handling, or malicious behavior present.

4
Files scanned
2,560
Lines analyzed
3
findings
claude
Audited by
No security issues found

Audit version 2

Safe

Jan 12, 2026, 04:58 PM

All 152 static findings are FALSE POSITIVES. The skill consists only of markdown documentation files with Python code examples for the COBRApy metabolic modeling library. The 'backtick execution' flags triggered on Python docstrings in code blocks. 'Weak crypto' flags triggered on scientific terms. 'System reconnaissance' flags triggered on metabolic modeling terminology like 'blocked reactions' and 'essential genes'. 'Credential access' flags triggered on model attribute references (model.reactions). No executable code, network requests, or credential handling found.

3
Files scanned
1,713
Lines analyzed
3
findings
claude
Audited by
No security issues found

Risk Factors

⚡ Contains scripts (4)
⚙️ External commands (120)
references/api_quick_reference.md:9-22 references/api_quick_reference.md:22-26 references/api_quick_reference.md:26-33 references/api_quick_reference.md:33-39 references/api_quick_reference.md:39-65 references/api_quick_reference.md:65-69 references/api_quick_reference.md:69-86 references/api_quick_reference.md:86-90 references/api_quick_reference.md:90-106 references/api_quick_reference.md:106-112 references/api_quick_reference.md:112-133 references/api_quick_reference.md:133-137 references/api_quick_reference.md:137-149 references/api_quick_reference.md:149-155 references/api_quick_reference.md:155-163 references/api_quick_reference.md:163-167 references/api_quick_reference.md:167-180 references/api_quick_reference.md:180-184 references/api_quick_reference.md:184-226 references/api_quick_reference.md:226-230 references/api_quick_reference.md:230-257 references/api_quick_reference.md:257-261 references/api_quick_reference.md:261-279 references/api_quick_reference.md:279-283 references/api_quick_reference.md:283-305 references/api_quick_reference.md:305-309 references/api_quick_reference.md:309-327 references/api_quick_reference.md:327-333 references/api_quick_reference.md:333-346 references/api_quick_reference.md:346-350 references/api_quick_reference.md:350-363 references/api_quick_reference.md:363-367 references/api_quick_reference.md:367-383 references/api_quick_reference.md:383-389 references/api_quick_reference.md:389-405 references/api_quick_reference.md:405-409 references/api_quick_reference.md:409-419 references/api_quick_reference.md:419-423 references/api_quick_reference.md:423-439 references/api_quick_reference.md:439-443 references/api_quick_reference.md:443-451 references/api_quick_reference.md:451-457 references/api_quick_reference.md:457-479 references/api_quick_reference.md:479-485 references/api_quick_reference.md:485-505 references/api_quick_reference.md:505-509 references/api_quick_reference.md:509-520 references/api_quick_reference.md:520-524 references/api_quick_reference.md:524-532 references/api_quick_reference.md:532-538 references/api_quick_reference.md:538-550 references/api_quick_reference.md:550-554 references/api_quick_reference.md:554-573 references/api_quick_reference.md:573-577 references/api_quick_reference.md:577-589 references/api_quick_reference.md:589-595 references/api_quick_reference.md:595-613 references/api_quick_reference.md:613-617 references/api_quick_reference.md:617-632 references/api_quick_reference.md:632-636 references/api_quick_reference.md:636-653 references/workflows.md:9-80 references/workflows.md:80-86 references/workflows.md:86-180 references/workflows.md:180-186 references/workflows.md:186-282 references/workflows.md:282-288 references/workflows.md:288-423 references/workflows.md:423-429 references/workflows.md:429-591 SKILL.md:22-35 SKILL.md:35-38 SKILL.md:38-43 SKILL.md:43-48 SKILL.md:48-64 SKILL.md:64-69 SKILL.md:69-85 SKILL.md:85-88 SKILL.md:88-91 SKILL.md:91-94 SKILL.md:94-97 SKILL.md:97-102 SKILL.md:102-119 SKILL.md:119-124 SKILL.md:124-148 SKILL.md:148-153 SKILL.md:153-175 SKILL.md:175-180 SKILL.md:180-195 SKILL.md:195-200 SKILL.md:200-221 SKILL.md:221-226 SKILL.md:226-240 SKILL.md:240-245 SKILL.md:245-285 SKILL.md:285-291 SKILL.md:291-303 SKILL.md:303-307 SKILL.md:307-323 SKILL.md:323-327 SKILL.md:327-344 SKILL.md:344-348 SKILL.md:348-369 SKILL.md:369-374 SKILL.md:374-393 SKILL.md:393-398 SKILL.md:398-399 SKILL.md:399-408 SKILL.md:408-412 SKILL.md:412-413 SKILL.md:413-414 SKILL.md:414-418 SKILL.md:418-427 SKILL.md:427-431 SKILL.md:431-433 SKILL.md:433-438 SKILL.md:438-439 SKILL.md:439-450 SKILL.md:450-457 SKILL.md:457-458
🌐 Network access (2)

Audit version 1

Safe

Jan 4, 2026, 05:01 PM

Documentation-only skill containing markdown files with COBRApy workflow examples. No executable code, network calls, file system access, or external commands present. Pure instructional content for metabolic modeling.

6
Files scanned
1,925
Lines analyzed
0
findings
claude
Audited by
No security issues found