Audit History
biopython - 7 audits
Version comparison
Capability and finding changes across audited versions, newest first.
| Version | Date | Result | Review items | Change vs previous |
|---|---|---|---|---|
| v7 Latest | Jul 5, 2026, 06:16 PM | No confirmed findings | 0 | No capability change |
| v6 | Jul 5, 2026, 06:16 PM | No confirmed findings | 0 | No capability change |
| v5 | Jun 30, 2026, 05:56 AM | 3 confirmed | 1 | No capability change |
| v4 | Jan 17, 2026, 05:49 AM | No confirmed findings | 0 | No capability change |
| v3 | Jan 17, 2026, 05:49 AM | No confirmed findings | 0 | Env variables |
| v2 | Jan 12, 2026, 04:20 PM | No confirmed findings | 0 | External commandsFilesystem accessNetwork access |
| v1 | Jan 5, 2026, 04:01 PM | No confirmed findings | 0 | Baseline |
Jul 5, 2026, 06:16 PM
All static findings were adjudicated as false positives after reviewing the referenced documentation context. The skill is a Markdown guidance package for Biopython workflows, and I found no prompt injection, credential exfiltration, hidden execution, or malicious network intent.
Risk Factors
🔑 Env variables (4)
📁 Filesystem access (6)
🌐 Network access (6)
⚙️ External commands (50)
Jul 5, 2026, 06:16 PM
All static findings were adjudicated as false positives after reviewing the referenced documentation context. The skill is a Markdown guidance package for Biopython workflows, and I found no prompt injection, credential exfiltration, hidden execution, or malicious network intent.
Risk Factors
🔑 Env variables (4)
📁 Filesystem access (6)
🌐 Network access (6)
⚙️ External commands (50)
Jun 30, 2026, 05:56 AM
Static analysis produced a risk score of 100 because it treated markdown code fences, Biopython examples, placeholders, and scientific terms as dangerous code. Human review found no malicious intent or prompt injection, but the skill legitimately documents network calls, file I/O, API key configuration, and local BLAST command wrappers, so publication should carry a medium-risk warning.
Confirmed security concerns (3)
Capability review items (1)
These are real local capabilities that may be expected for this skill, so they require review but are not counted as confirmed malicious behavior.
Static false positives ignored (3)
These static matches were dismissed by semantic review or matched schema-only tokens, so they are shown for transparency but do not drive the quality score.
Risk Factors
🌐 Network access (3)
📁 Filesystem access (3)
🔑 Env variables (3)
⚙️ External commands (3)
Detected Patterns
Jan 17, 2026, 05:49 AM
All 546 static findings are FALSE POSITIVES. This skill contains only markdown documentation files with Python code examples for Biopython. The scanner misidentified markdown code block delimiters as shell commands, Biopython module names (Bio.Align, Bio.Phylo) as cryptographic algorithms, and documentation placeholders as real secrets. No executable code exists. This is a legitimate scientific documentation skill.
Risk Factors
🔑 Env variables (6)
⚙️ External commands (415)
📁 Filesystem access (6)
🌐 Network access (6)
Jan 17, 2026, 05:49 AM
All 546 static findings are FALSE POSITIVES. This skill contains only markdown documentation files with Python code examples for Biopython. The scanner misidentified markdown code block delimiters as shell commands, Biopython module names (Bio.Align, Bio.Phylo) as cryptographic algorithms, and documentation placeholders as real secrets. No executable code exists. This is a legitimate scientific documentation skill.
Risk Factors
🔑 Env variables (6)
⚙️ External commands (415)
📁 Filesystem access (6)
🌐 Network access (6)
Jan 12, 2026, 04:20 PM
All 525 static findings are FALSE POSITIVES. This is a documentation skill containing markdown files with Biopython code examples. The static analyzer flagged shell commands, file I/O, and network access patterns in documentation examples, but these represent legitimate bioinformatics operations in markdown files, not executable malicious code. No actual security risks present.
Risk Factors
⚙️ External commands (3)
📁 Filesystem access (2)
🌐 Network access (2)
Jan 5, 2026, 04:01 PM
This is a documentation-only skill that provides comprehensive information about Biopython, a legitimate bioinformatics Python library. The skill contains no executable code, network calls, file operations, or security-sensitive capabilities. It consists entirely of educational content and code examples for bioinformatics analysis.