nature-paper-to-patent

The static analyzer flagged 291 potential issues across 34 files, but the vast majority are false positives from regex pattern matching on documentation and standard library usage. All 122 'weak cryptographic algorithm' alerts are false positives matching on Python `hashlib` imports for content hashing and on the word 'hash' in regex patterns. The 154 'external_commands' alerts are markdown backtick characters (code formatting) in README and reference files, not actual command execution. The 5 'shutil operations' are legitimate file copying for project workspace initialization. The 1 `subprocess.run` call in build_patent_package.py uses hardcoded script paths with no user input injection vector. No malicious intent, data exfiltration, or unauthorized network activity was found.